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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2021.1
- 수록면
- 461 - 464 (4page)
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Escherichia coli normally colonizes the lower intestine of animals and humans, but some serotypes are foodborne pathogens. The Escherichia coli K_EC180 was isolated from swine feces that were collected from a weaner pig. In this genome announcement, E. coli K_EC180 was sequenced using PacBio RS II and Illumina NextSeq 500 platforms. The complete chromosome of E. coli K_EC180 is composed of one circular chromosome (5,017,281 bp) with 50.4% of guanine + cytosine (G + C) content, 4,935 of coding sequence (CDS), 88 of tRNA, and 22 of rRNA genes. The complete genome of E. coli K_EC180 contains the toxin genes such as shiga-like toxins (stxA and stxB).
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등록된 정보가 없습니다.
참고문헌 (10)
참고문헌 신청
Robin B. Guevarra / 2019 / Piglet gut microbial shifts early in life: causes and effects / Journal of Animal Science and Biotechnology 10(1):1
Li H / Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
Bruce J. Walker / 2014 / Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement / PLoS ONE 9(11):e112963
Felipe A. Simão / 2015 / BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs / Bioinformatics 31(19):3210~3212
Alexey Gurevich / 2013 / QUAST: quality assessment tool for genome assemblies / Bioinformatics 29(8):1072~1075
Li H / Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
Bruce J. Walker / 2014 / Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement / PLoS ONE 9(11):e112963
Felipe A. Simão / 2015 / BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs / Bioinformatics 31(19):3210~3212
Alexey Gurevich / 2013 / QUAST: quality assessment tool for genome assemblies / Bioinformatics 29(8):1072~1075
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