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Efficient Storage Scheme for Microarray Data using Structural Similarity

논문 기본 정보

저자정보
(세종대학교) (세종대학교) (세종대학교) (세종대학교)
저널정보
대한전자공학회 ICEIC : International Conference on Electronics, Informations and Communications ICEIC : 2008
발행연도
수록면
826 - 829 (4page)
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Efficient Storage Scheme for Microarray Data using Structural Similarity
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    초록·키워드

    As one of typical techniques for acquiring bioinformation, gene microarray was solidly entrenched. However microarray experiments create very complex and huge amount of data and many researchers were being pinched at managing microarray data. Microarray was standardized by MGED group and MAGE-ML is established as a format expressed for MAGE-OM by XML. As establishing this standard, database design for microarray data has gained interest in bioinformatics area. However it has no consideration for efficient storage construction. In this paper, we propose strategies that efficiently convert complex structure of MAGE-ML into relatively compact structure in RDBMS based on the structural similarity of MAGE-ML element. The model induces fewer numbers of joins from database.

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      UCI(KEPA) : I410-ECN-0101-2012-569-004333185