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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2021.1
- 수록면
- 104 - 111 (8page)
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At the reproductive development stage of rice (Oryza sativa L.), temperature stress can decrease spikelet fertility, ultimately resulting in a yield loss. In this study, a total of 98 rice varieties were used in genome-wide association study (GWAS) to understand spikelet fertility under a high temperature (SFHT). GWAS results revealed that two lead SNPs were significantly associated with SFHT. Candidate genes located within ± 250 kb of the corresponding SNP position were discovered, resulting in a total of 21 candidate genes on chromosome 10 and 18 candidate genes on chromosome 11. Based on previously reported function and haplotype analysis, Os10g0177200 (EF-HAND 2domain containing protein) as one candidate gene showed significant differences among groups of haplotypes. This candidate gene will be further evaluated for its function to determine whether it is useful for improving molecular breeding studies and developing new high temperature tolerant rice varieties.
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참고문헌 (38)
참고문헌 신청
Aghamolki MTK / 2014 / Heat stress effects on yield parameters of selected rice cultivars at reproductive growth stages / J. Food Agric. Environ 12:741~746
Alexander DH / 2011 / Enhancements to the ADMIXTURE algorithm for individual ancestry estimation / BMC Bioinformatics 12:246
Barnett GC / 2014 / A genome wide association study (GWAS) providing evidence of an association between common genetic variants and late radiotherapy toxicity / Radio. Oncol 111:178~185
Bradbury PJ / 2007 / TASSEL : software for association mapping of complex traits in diverse samples / Bioinformatics 23:2633~2635
Chang L / 2019 / Characterization of Two EF‐hand Domain‐containing Proteins from Toxoplasma gondii / J. Eukaryot. Microbiol 66:343~353
Alexander DH / 2011 / Enhancements to the ADMIXTURE algorithm for individual ancestry estimation / BMC Bioinformatics 12:246
Barnett GC / 2014 / A genome wide association study (GWAS) providing evidence of an association between common genetic variants and late radiotherapy toxicity / Radio. Oncol 111:178~185
Bradbury PJ / 2007 / TASSEL : software for association mapping of complex traits in diverse samples / Bioinformatics 23:2633~2635
Chang L / 2019 / Characterization of Two EF‐hand Domain‐containing Proteins from Toxoplasma gondii / J. Eukaryot. Microbiol 66:343~353
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