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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2017.1
- 수록면
- 855 - 866 (12page)
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초록· 키워드
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Zika virus (ZIKV) is a member of the family Flaviviridae and contains a single-stranded RNA genome with positive-polarity. Like Dengue, Zika virus uses Aedes aegypti mosquito as a vector to infect human with a wide range of clinical signs, from asymptomatic to influenzalike syndrome. Despite significant progress in genomic analyses, how a viral relationship with two different hosts affect the overall fitness, constancy, and dodging of hosts immune system are elusive. Here we analyzed Zika virus codon-based evolution using eleven strains from different geographical locations. The overall codon usage was similar and slightly bias among all strains. An occurrence of A-ending in highly-preferred codons and analysis by various approaches strongly suggests that mutational bias is the main force shaping codon usage in this virus. However, natural selection and geographical realities cannot be ignored in marginal influence on codon usage. The viral genomes naturally favor Aedes aegypti over human host for tRNA pool in translation. Such findings will assist researchers in understanding elements contribute to viral adaptation and evolutionary setup with hosts.
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참고문헌 (59)
참고문헌 신청
Ai JW / 2016 / Zika virus outbreak: “a perfect storm.” / Emerg Microbes Infect 5:e21
Aragonès L / 2010 / Fine-tuning translation kinetics selection as the driving force of codon usage bias in the hepatitis a virus capsid / PLoS Pathog 6:1~12
Ayres CFJ / 2016 / Identification of Zika virus vectors and implications for control / Lancet Infect Dis 16:278~279
Baronti C / 2014 / Complete coding sequence of Zika virus from a French Polynesia outbreak in 2013 / Genome Announc 2(3):e00500~e00514
Berthet N / 2014 / Molecular characterization of three Zika flaviviruses obtained from sylvatic mosquitoes / Vector Borne Zoonotic Dis 14:862~865
Aragonès L / 2010 / Fine-tuning translation kinetics selection as the driving force of codon usage bias in the hepatitis a virus capsid / PLoS Pathog 6:1~12
Ayres CFJ / 2016 / Identification of Zika virus vectors and implications for control / Lancet Infect Dis 16:278~279
Baronti C / 2014 / Complete coding sequence of Zika virus from a French Polynesia outbreak in 2013 / Genome Announc 2(3):e00500~e00514
Berthet N / 2014 / Molecular characterization of three Zika flaviviruses obtained from sylvatic mosquitoes / Vector Borne Zoonotic Dis 14:862~865
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Structure and Function of the Influenza A Virus Non-Structural Protein 1
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Screening of Antigenic Epitopes in Zika Virus Nonstructural Protein 1 (ZIKV-NS1)
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Development of Human Monoclonal Antibody against Zika Virus Envelop Protein Using Phage Display Technology
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Dynamics of Viral and Host 3D Genome Structure upon Infection
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