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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 저널정보
- 한국미생물생명공학회 Journal of Microbiology and Biotechnology Journal of Microbiology and Biotechnology 제29권 제5호
- 발행연도
- 2019.1
- 수록면
- 794 - 808 (15page)
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초록· 키워드
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Bacillus velezensis strain WRN014 was isolated from banana fields in Hainan, China. Bacillus velezensis is an important member of the plant growth-promoting rhizobacteria (PGPR) which can enhance plant growth and control soil-borne disease. The complete genome of Bacillus velezensis WRN014 was sequenced by combining Illumina Hiseq 2500 system and Pacific Biosciences SMRT high-throughput sequencing technologies. Then, the genome of Bacillus velezensis WRN014, together with 45 other completed genome sequences of the Bacillus velezensis strains, were comparatively studied. The genome of Bacillus velezensis WRN014 was 4,063,541bp in length and contained 4,062 coding sequences, 9 genomic islands and 13 gene clusters. The results of comparative genomic analysis provide evidence that (i) The 46 Bacillus velezensis strains formed 2 obviously closely related clades in phylogenetic trees. (ii) The pangenome in this study is open and is increasing with the addition of new sequenced genomes. (iii) Analysis of single nucleotide polymorphisms (SNPs) revealed local diversification of the 46 Bacillus velezensis genomes. Surprisingly, SNPs were not evenly distributed throughout the whole genome. (iv) Analysis of gene clusters revealed that rich gene clusters spread over Bacillus velezensis strains and some gene clusters are conserved in different strains. This study reveals that the strain WRN014 and other Bacillus velezensis strains have potential to be used as PGPR and biopesticide.
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참고문헌 (54)
참고문헌 신청
Lugtenberg B / 2009 / Plant-growth-promoting rhizobacteria / Annu. Rev. Microbiol 63:541~556
Bloemberg GV / 2001 / Molecular basis of plant growth promotion and biocontrol by rhizobacteria / Curr. Opin. Plant Biol 4:343~350
Ruiz-García C / 2005 / Bacillus velezensis sp, nov., a surfactantproducing bacterium isolated from the river Vélez in Málaga, southern Spain / Int. J. Syst. Evol. Microbiol 55:191~195
Ye M / 2018 / Characteristics and application of a novel species of Bacillus : Bacillus velezensis / ACS Chem. Biol 13:500~505
Zhang N / 2013 / Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates / BMC Genomics 16:685~694
Bloemberg GV / 2001 / Molecular basis of plant growth promotion and biocontrol by rhizobacteria / Curr. Opin. Plant Biol 4:343~350
Ruiz-García C / 2005 / Bacillus velezensis sp, nov., a surfactantproducing bacterium isolated from the river Vélez in Málaga, southern Spain / Int. J. Syst. Evol. Microbiol 55:191~195
Ye M / 2018 / Characteristics and application of a novel species of Bacillus : Bacillus velezensis / ACS Chem. Biol 13:500~505
Zhang N / 2013 / Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates / BMC Genomics 16:685~694
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