The complete mitochondrial genome of a threatened loach (Sinibotia reevesae) and its phylogeny

Yuan‑Chao Zou; Bi‑Wen Xie; Chuan‑Jie Qin; Yong‑Ming Wang; Deng‑Yue Yuan; Rui Li; Zheng‑Yong Wen

추천

검색

자료유형: 학술저널

저자정보: Yuan‑Chao Zou (Southwest University) Bi‑Wen Xie (Neijiang Normal University) Chuan‑Jie Qin (Neijiang Normal University) Yong‑Ming Wang (Neijiang Normal University) Deng‑Yue Yuan (Neijiang Normal University) Rui Li (Neijiang Normal University) Zheng‑Yong Wen (Neijiang Normal University)

저널정보: 한국유전학회 Genes & Genomics Genes & Genomics Vol.39 No.7

발행연도: 2017.1

수록면: 767 - 778 (12page)

이용수

📌

연구주제

📖

연구배경

🔬

연구방법

🏆

연구결과

초록· 키워드

오류제보하기

In present study, the complete mitochondrial genome of Sinibotia reevesae was first sequenced using the next-generation sequencing technology and annotated using bioinformatic tools. The circular mitochondrial genome was 16,572 bp in length, and contained 13 proteincoding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 displacement loop locus. It presents a typical gene organization and order for completely sequenced cypriniformes mitogenomes. The control region could be divided into three parts included the extended termination associated sequence domain, the central conserved domain and the conserved sequence block. Interestingly, two stemloop domains were found in control region and OL region, respectively. Furthermore, phylogenetic analyses using concatenated amino acid and nucleotide sequences of the 13 protein-coding genes with two different methods (Maximum likelihood and Bayesian analysis) both highly supported the close relationship of S. reevesae and Sinibotia superciliaris, which was in line with the previous classifications based on morphological and molecular studies. These data provide useful information for a better understanding of the mitogenomic diversities and evolution in fish as well as novel genetic markers for studying population genetics and species identification.

참고문헌 (50)

참고문헌 신청

Abascal F / 2005 / ProtTest: selection of best-fit models of protein evolution / Bioinformatics 21:2104~2105

Boore JL / 1999 / Animal mitochondrial genomes / Nucleic Acids Res 27:1767~1780

Chang HW / 1944 / Notes on the fishes of Western Szechwan and Eastern Sikang / Sincnsia 15:48~50

Clayton DA / 1992 / Transcription and replication of animal mitochondrial DNAs / Int Rev Cytol 141:217~232

Ding RH / 1994 / The fishes of Sichuan. Sichuan Publishing House of Science and Technology / Chengdu

함께 읽어보면 좋을 논문

논문 유사도에 따라 DBpia 가 추천하는 논문입니다. 함께 보면 좋을 연관 논문을 확인해보세요!

이 논문의 저자 정보

Yuan‑Chao Zou

소속기관 Southwest University

주요연구분야 자연과학 > 생물학

논문수 2 이용수 0

Bi‑Wen Xie